Gossypium hirsutum (upland cotton): 107905737
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Entry
107905737 CDS
T04793
Name
(RefSeq) farnesyl pyrophosphate synthase 1-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00900
Terpenoid backbone biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107905737
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
107905737
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
107905737
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
107905737
Prenyltransferases [BR:
ghi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
107905737
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Zein-binding
Motif
Other DBs
NCBI-GeneID:
107905737
NCBI-ProteinID:
NP_001313890
UniProt:
W5ZRY0
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All DBs
Position
D05:15896082..15899188
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AA seq
342 aa
AA seq
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MADLRSAFLNVYSQLKSELLQDPSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYRL
LKDGKKLTQDEIFLTSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVN
DGVILRNHITRILKNHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYSL
QQHRRIVQYKTAYYSFYLPVACALVMAGENLDNHIGVKNILVDMGIYFQVQDDYLDCFGN
PETIGKIGTDIEDFKCSWLVVKALEICNEEQKKVLYENYGKPDTANVAKVKALYNELNLK
GVFEDYESKSYGRLVTSIEAHPSKPVQAVLKSFLGKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcaggtcagcatttctcaatgtgtattcccagctcaaatcggagctcctt
caggatccttctttcgagtttaccgatgattctcgtcaatgggttgaacggatgctggac
tacaatgtgcctggagggaaactgaatcgtggactttctgtgattgatagctaccgcctg
ttgaaagatggaaagaaattgacccaagatgagatttttcttacaagtgcgctcggttgg
tgtattgaatggcttcaggcatattttcttgttcttgatgacatcatggacagctctcac
acccggcgtggccagccttgttggtttagattgccgaaggttggtatgattgctgtaaat
gatggtgttatacttcgcaatcacatcaccaggattctcaaaaatcactttcgtgggaaa
ccttactatgtggatctgctagatttatttaatgaggtggagtttcaaacagcttcagga
cagatgatagatctgattacaacacttgaaggagaaaaggatctatccaaatactcattg
caacagcaccgtcgcattgttcagtacaagactgcctattattcattttatcttcctgtt
gcgtgtgcactggttatggctggtgaaaatcttgacaaccacatcggtgtaaagaacatt
cttgttgacatgggaatctactttcaagtacaggatgactatttggattgctttggcaat
cctgagaccattggtaagattggaaccgatattgaagattttaagtgctcttggttggtg
gttaaagctttggaaatctgtaatgaggagcagaagaaagtgttatatgagaactatggg
aaaccagacactgccaatgttgctaaagtgaaggctctatacaatgagcttaatctcaag
ggcgtatttgaggactacgaaagcaagagctatgggaggctcgtaacctcaattgaagct
catcctagcaaaccagtgcaagcagtgttgaagtcattcttagggaagatctacaagagg
cagaaataa
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