Lates calcarifer (barramundi perch): 108900720
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Entry
108900720 CDS
T04895
Name
(RefSeq) serine palmitoyltransferase 1 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00600
Sphingolipid metabolism
lcf01100
Metabolic pathways
Module
lcf_M00094
Ceramide biosynthesis
lcf_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108900720
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108900720
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
108900720
Amino acid related enzymes [BR:
lcf01007
]
Aminotransferase (transaminase)
Class II
108900720
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
108900720
NCBI-ProteinID:
XP_018557416
UniProt:
A0A4W6DKE5
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Position
LG9:22045251..22056571
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AA seq
472 aa
AA seq
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MASGQQWVLVEMVQAFYEAPAYHLILEGILILWIIRLLFSKTYKLHETYKLTEKEKEDLI
EEWQPEPLVPPVSKDHPSLNYDIVTGPPSHKIIINGKECTNFASFNFLGLLDNERVKQKA
LASLKKYGVGTCGPRGFYGTFDVHLELESRLARFMKTEEAIIYSYGFATIASAIPAYSKR
GDIIFVDEAACFSIQKGLQASRSFIKYFKHNDMEDLERLLKEQELEDQRNPRKARVTRKF
IVVEGLYINTADICPLPELVELKYKYKVRIFLEESLSFGVLGEHGRGVTEHYGVNIDDID
LISANMENAVASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPMLAAAAIEALNIMEEDPD
IFAVLRKKCKHVYKALQGTPGLKLVGVPFAPALHLQLERSSGSRDSDMQLLRSLVDYCLE
GQVALTLARYLEKEERFLPPPSIRVVVTIEQTEEDIQKLVSCIQEAVSANLK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgggcagcaatgggtgttggtggaaatggtgcaagcgttttatgaggctcct
gcttatcacctgattctggaggggatcctcatactgtggatcatcagactcctgttctct
aagacctacaaacttcatgagacctataaactgacagagaaggaaaaggaggacctgatt
gaggagtggcagccagagcctcttgttcctcctgtatccaaagaccatccctccctcaac
tatgatattgtcactggacctcctagccacaaaatcataatcaatgggaaagagtgcact
aactttgcatcatttaacttcctgggtctcctcgacaatgagcgggttaagcaaaaggct
ttggcatcactgaagaaatatggcgtgggtacatgtggtccaagaggcttctatggaacc
tttgatgttcacctggagcttgagagtcgtctggcaagattcatgaaaacagaagaggcc
attatctattcatatggctttgcaaccattgctagtgcaattcctgcttactccaagagg
ggggacatcatctttgtggatgaagcagcctgcttctccatccagaaaggtcttcaagca
tcccgcagctttatcaaatacttcaaacacaatgacatggaggatctggagaggctgctg
aaggagcaggagctggaggatcagaggaatcctcgtaaagcacgagtgacccggaagttc
attgtagtggaggggctgtacatcaacactgcagacatctgtcctctccctgaactggtg
gagctgaagtacaagtataaagtgcggatctttctagaggagagcctgtcttttggtgtt
ttgggagaacatggccgcggagtcacagaacattatggggtcaatatagatgacattgac
ctgatcagtgctaacatggagaacgctgtggcctctataggaggcttctgctgcggacgc
tcctttgtcatcgaccaccagcgtctgtcaggtcaaggttactgtttctctgcatctctg
cctcccatgttggctgctgctgccatcgaggccctcaacatcatggaggaagatccagat
atttttgctgtcctgaggaaaaagtgcaaacatgtttacaaggctttacagggaactcca
ggtctgaagttagtgggagtaccatttgccccagctcttcacttacagctggagagaagt
tcaggctccagagactctgacatgcagctgctgcgctctcttgtagattattgtttggaa
ggacaggtggctctgaccctcgctcgttacttggaaaaagaggagcgcttcctcccccct
cccagcatcagagtggtggtcaccattgaacagacagaagaggacatccagaagcttgtg
tcctgcatccaagaggcagtttcagctaacctcaaatga
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