Manihot esculenta (cassava): 110622015
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Entry
110622015 CDS
T05761
Name
(RefSeq) farnesyl pyrophosphate synthase 1 isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00900
Terpenoid backbone biosynthesis
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
Module
mesc_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
110622015
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mesc01006
]
110622015
Enzymes [BR:
mesc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
110622015
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
110622015
Prenyltransferases [BR:
mesc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
110622015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
110622015
NCBI-ProteinID:
XP_021622042
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All DBs
Position
9:22240517..22245255
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AA seq
342 aa
AA seq
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MADLKSTFLRVYSVLKQELLEDPAFEWTPDSRQWVERMLDYNVPGGKLNRGLSVVDSYKL
LKDGRELTEEEIFLASALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRVPKVGLIATN
DGILLRNHIPRILKKHFRGKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTL
SLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHIAVKDILVQMGIYFQVQDDYLDCFGD
PKTIGKIGTDIEDFKCSWLVVKALEHCDEEQKKVLYEHYGKADPASVAKVKVLYNELNLQ
GVFMEYENESYEILVTSIEAHPSKSVQAVLKSFLAKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctgaagtcaacattcttgagggtctattctgtcctcaagcaggagctcctt
gaggaccctgctttcgaatggacaccagattcccgtcaatgggttgagcggatgttggac
tataatgtgcctggagggaagctgaatagggggctttctgtggttgacagctacaaattg
ttgaaagatggacgggaattaacagaagaagaaatctttcttgcaagtgctcttggttgg
tgtattgaatggctgcaagcgtattttcttgtccttgatgacattatggatagttctcat
acccgacgtggtcagccttgttggtttagggtgcccaaggttggtctgattgccacaaat
gatgggattttgcttcgcaatcacattcccaggattcttaaaaagcacttccgggggaag
gcatactatgtagatcttctagatttgtttaatgaggtggagtttcaaacagcctcagga
cagatgatagatctaattacaacacttgaaggagaaaaggatttatccaaatacacttta
tcactgcaccggagaattgttcagtacaaaactgcctactactcattttatcttcccgtt
gcttgtgcattgctcatggcgggtgagaatctggacaatcacattgctgtgaaagacatt
cttgttcagatgggaatctacttccaagtacaggatgattatttggattgttttggtgat
ccgaagacaattggtaagataggaacagatatagaagattttaagtgctcgtggttggtc
gtgaaggctttagaacattgcgatgaagagcaaaagaaagtgttatatgagcactatggg
aaagctgacccagccagtgtagcaaaggtgaaggtcctttataatgaactgaaccttcag
ggagtattcatggagtatgagaatgaaagctatgagatattagtgacttccattgaagct
catcctagcaagtcagtgcaagcagtgttgaaatcctttttggccaaaatttacaagaga
cagaaatag
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