Pistacia vera (pistachio): 116107993
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Entry
116107993 CDS
T07386
Name
(RefSeq) probable pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00040
Pentose and glucuronate interconversions
pvy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116107993
Enzymes [BR:
pvy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116107993
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116107993
NCBI-ProteinID:
XP_031250137
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All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MGSLPYADVENSLRALAGRAEGFGRFAIGGLHGPLYFVTSLSDDGPGSLREGCRRKEPLW
IVFEVSGTIHLLSYLNVSSYKTIDGRGQRVKLSGKGLRLKECEHIIVCNLEFEGGRGHDV
DGIQIKPKSRHIWIDRCSLSDFDDGLIDITRQSTDITVSRCYFTRHDKTMLIGADPSHVE
DRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GKKKKTFEYYTEKAADKPEAKSGVIRSEGDLFLNGALACLLTGVGDEHVFHPSEYYPMWT
MEAPSDSLKEVLKICTGWQSIARPADLMVAT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgcttccgtacgctgacgtggagaacagtctgagagcattggcgggtcgggcc
gagggttttggcagattcgccattggcgggctccacggcccgctctacttcgtcaccagt
ttatctgatgatggtccaggatcgcttcgtgagggatgccggagaaaagaaccattgtgg
attgtttttgaagtttcgggtacaattcatcttttgtcgtacttgaatgtatcgtcttat
aagacgattgatgggcggggccaaagggttaagctttcagggaaagggttgagattgaag
gaatgtgaacatataattgtatgtaatcttgagtttgaaggtggtagaggacatgatgtt
gatggcattcaaataaagccgaaatctagacacatatggatagatcgatgtagccttagt
gattttgatgatgggctcatagatatcacgagacaaagcacagacattacagtttctaga
tgttattttactcgtcatgataagacaatgcttattggagcagacccctctcatgttgaa
gatagatgcattcgagtgaccattcaccattgtttttttgatgggacaaggcaaagacat
cctcgccttagatttgggaaggttcatctgtacaataattacaccagaaattggggcatt
tatgcagtttgtgcaagtgtagagtcccagatatactcccagtgcaacatatatgaagca
ggaaagaagaaaaagacctttgaatactatacagagaaggcagcagacaagccggaagca
aagtctggtgtaataagatctgaaggagacttgtttctgaatggagcactagcttgctta
ttgaccggagtgggggatgaacatgtgttccacccaagtgaatattatccgatgtggaca
atggaagcaccctcagattctttaaaggaagtcctcaaaatttgtacgggttggcaatcc
attgctcgaccagcagacctgatggtagctacatag
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