default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDOlivier Gascuel
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2023
[j44]Daniele Catanzaro
, Martin Frohn, Olivier Gascuel, Raffaele Pesenti:
A massively parallel branch-&-bound algorithm for the balanced minimum evolution problem. Comput. Oper. Res. 158: 106308 (2023)- 2022
- [j43]Daniele Catanzaro, Martin Frohn, Olivier Gascuel, Raffaele Pesenti:
A tutorial on the balanced minimum evolution problem. Eur. J. Oper. Res. 300(1): 1-19 (2022) - [j42]Grigorii Sukhorukov, Maryam Khalili, Olivier Gascuel, Thierry Candresse, Armelle Marais-Colombel, Macha Nikolski:
VirHunter: A Deep Learning-Based Method for Detection of Novel RNA Viruses in Plant Sequencing Data. Frontiers Bioinform. 2 (2022) - 2021
- [j41]Jia-Ming Chang, Evan W. Floden, Javier Herrero, Olivier Gascuel, Paolo Di Tommaso, Cédric Notredame:
Incorporating alignment uncertainty into Felsenstein's phylogenetic bootstrap to improve its reliability. Bioinform. 37(11): 1506-1514 (2021) - [j40]Frédéric Lemoine, Luc Blassel, Jakub Voznica, Olivier Gascuel:
COVID-Align: accurate online alignment of hCoV-19 genomes using a profile HMM. Bioinform. 37(12): 1761-1762 (2021) - [j39]Luc Blassel, Anna Tostevin, Christian Julian Villabona-Arenas, Martine Peeters, Stéphane Hué, Olivier Gascuel:
Using machine learning and big data to explore the drug resistance landscape in HIV. PLoS Comput. Biol. 17(8) (2021)
2010 – 2019
- 2019
- [j38]Adrien Oliva, Sylvain Pulicani, Vincent Lefort, Laurent Bréhélin, Olivier Gascuel, Stéphane Guindon:
Accounting for ambiguity in ancestral sequence reconstruction. Bioinform. 35(21): 4290-4297 (2019) - [j37]Frédéric Lemoine, Damien Correia, Vincent Lefort, Olivia Doppelt-Azeroual, Fabien Mareuil, Sarah Cohen-Boulakia, Olivier Gascuel:
NGPhylogeny.fr: new generation phylogenetic services for non-specialists. Nucleic Acids Res. 47(Webserver-Issue): W260-W265 (2019) - [c20]Jakub Truszkowski, Olivier Gascuel, Krister M. Swenson:
Rapidly Computing the Phylogenetic Transfer Index. WABI 2019: 20:1-20:12 - 2018
- [j36]Frédéric Lemoine, Jean-Baka Domelevo Entfellner, Eduan Wilkinson, Damien Correia, Miraine Dávila Felipe, Tulio de Oliveira, Olivier Gascuel:
Renewing Felsenstein's phylogenetic bootstrap in the era of big data. Nat. 556(7702): 452-456 (2018) - [j35]Christophe Menichelli, Olivier Gascuel, Laurent Bréhélin:
Improving pairwise comparison of protein sequences with domain co-occurrence. PLoS Comput. Biol. 14(1) (2018) - 2017
- [j34]Emma Saulnier, Olivier Gascuel, Samuel Alizon:
Inferring epidemiological parameters from phylogenies using regression-ABC: A comparative study. PLoS Comput. Biol. 13(3) (2017) - 2016
- [j33]Olivier Gascuel, Mike A. Steel:
A 'Stochastic Safety Radius' for Distance-Based Tree Reconstruction. Algorithmica 74(4): 1386-1403 (2016) - [j32]Manuel Binet, Olivier Gascuel, Céline Scornavacca, Emmanuel J. P. Douzery, Fabio Pardi:
Fast and accurate branch lengths estimation for phylogenomic trees. BMC Bioinform. 17: 23 (2016) - [r2]Olivier Gascuel, Fabio Pardi, Jakub Truszkowski:
Distance-Based Phylogeny Reconstruction: Safety and Edge Radius. Encyclopedia of Algorithms 2016: 567-571 - 2015
- [j31]Jia-Ming Chang, Paolo Di Tommaso, Vincent Lefort, Olivier Gascuel, Cédric Notredame:
TCS: a web server for multiple sequence alignment evaluation and phylogenetic reconstruction. Nucleic Acids Res. 43(Webserver-Issue): W3-W6 (2015) - 2014
- [j30]Cuong Cao Dang, Le Sy Vinh, Olivier Gascuel, Bart Hazes, Si Quang Le:
FastMG: a simple, fast, and accurate maximum likelihood procedure to estimate amino acid replacement rate matrices from large data sets. BMC Bioinform. 15: 341 (2014) - 2013
- [j29]François Chevenet, Matthieu Jung, Martine Peeters, Tulio de Oliveira, Olivier Gascuel:
Searching for virus phylotypes. Bioinform. 29(5): 561-570 (2013) - [c19]Naama M. Kopelman, Lewi Stone, Olivier Gascuel, Noah A. Rosenberg:
The Behavior of Admixed Populations in Neighbor-Joining Inference of Population Trees. Pacific Symposium on Biocomputing 2013: 273-284 - 2012
- [j28]Nicolas Terrapon, Olivier Gascuel, Eric Maréchal, Laurent Bréhélin:
Fitting hidden Markov models of protein domains to a target species: application to Plasmodium falciparum. BMC Bioinform. 13: 67 (2012) - [c18]Amel Ghouila, Olivier Gascuel, Sadok Ben Yahia, Laurent Bréhélin:
Enhancing Protein Domain Detection Using Domain Co-occurrence and Domain Exclusion. DEXA Workshops 2012: 223-228 - 2011
- [j27]Cuong Cao Dang, Vincent Lefort, Le Sy Vinh, Si Quang Le, Olivier Gascuel:
ReplacementMatrix: a web server for maximum-likelihood estimation of amino acid replacement rate matrices. Bioinform. 27(19): 2758-2760 (2011)
2000 – 2009
- 2009
- [j26]Nicolas Terrapon, Olivier Gascuel, Eric Maréchal, Laurent Bréhélin:
Detection of new protein domains using co-occurrence: application to Plasmodium falciparum. Bioinform. 25(23): 3077-3083 (2009) - [j25]Magnus Bordewich, Olivier Gascuel, Katharina T. Huber, Vincent Moulton:
Consistency of Topological Moves Based on the Balanced Minimum Evolution Principle of Phylogenetic Inference. IEEE ACM Trans. Comput. Biol. Bioinform. 6(1): 110-117 (2009) - 2008
- [j24]Laurent Bréhélin, Olivier Gascuel, Olivier Martin:
Using repeated measurements to validate hierarchical gene clusters. Bioinform. 24(5): 682-688 (2008) - [j23]Si Quang Le, Olivier Gascuel, Nicolas Lartillot:
Empirical profile mixture models for phylogenetic reconstruction. Bioinform. 24(20): 2317-2323 (2008) - [j22]Laurent Bréhélin, Jean-François Dufayard, Olivier Gascuel:
PlasmoDraft: a database of Plasmodium falciparum gene function predictions based on postgenomic data. BMC Bioinform. 9 (2008) - [j21]Alexis Criscuolo, Olivier Gascuel:
Fast NJ-like algorithms to deal with incomplete distance matrices. BMC Bioinform. 9 (2008) - [j20]Alexis Dereeper, Valentin Guignon, Guillaume Blanc, Stéphane Audic, S. Buffet, François Chevenet, Jean-François Dufayard, Stéphane Guindon, Vincent Lefort, Magali Lescot, Jean-Michel Claverie, Olivier Gascuel:
Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Res. 36(Web-Server-Issue): 465-469 (2008) - [r1]Richard Desper, Olivier Gascuel:
Distance-Based Phylogeny Reconstruction (Optimal Radius). Encyclopedia of Algorithms 2008 - 2007
- [j19]Mathieu Lajoie, Denis Bertrand, Nadia El-Mabrouk, Olivier Gascuel:
Duplication and Inversion History of a Tandemly Repeated Genes Family. J. Comput. Biol. 14(4): 462-478 (2007) - [p2]Richard Desper, Olivier Gascuel:
The minimum evolution distance-based approach of phylogenetic inference. Mathematics of Evolution and Phylogeny 2007 - [p1]Olivier Gascuel, Denis Bertrand, Olivier Elemento:
Reconstructing the duplication history of tandemly repeated sequences. Mathematics of Evolution and Phylogeny 2007 - [e3]Olivier Gascuel:
Mathematics of Evolution and Phylogeny. Oxford University Press 2007, ISBN 978-0-19-923134-8 [contents] - 2006
- [j18]Elodie Duprat, Marie-Paule Lefranc, Olivier Gascuel:
A simple method to predict protein-binding from aligned sequences - application to MHC superfamily and ß2-microglobulin. Bioinform. 22(4): 453-459 (2006) - [c17]Denis Bertrand, Mathieu Lajoie, Nadia El-Mabrouk, Olivier Gascuel:
Evolution of Tandemly Repeated Sequences Through Duplication and Inversion. Comparative Genomics 2006: 129-140 - 2005
- [j17]Didier Gonze, Sylvie Pinloche, Olivier Gascuel, Jacques van Helden:
Discrimination of yeast genes involved in methionine and phosphate metabolism on the basis of upstream motifs. Bioinform. 21(17): 3490-3500 (2005) - [j16]Wim Hordijk, Olivier Gascuel:
Improving the efficiency of SPR moves in phylogenetic tree search methods based on maximum likelihood. Bioinform. 21(24): 4338-4347 (2005) - [j15]Olivier Elemento, Olivier Gascuel:
An exact and polynomial distance-based algorithm to reconstruct single copy tandem duplication trees. J. Discrete Algorithms 3(2-4): 362-374 (2005) - [j14]Stéphane Guindon, Franck Lethiec, Patrice Duroux, Olivier Gascuel:
PHYML Online - a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Res. 33(Web-Server-Issue): 557-559 (2005) - [j13]Denis Bertrand, Olivier Gascuel:
Topological Rearrangements and Local Search Method for Tandem Duplication Trees. IEEE ACM Trans. Comput. Biol. Bioinform. 2(1): 15-28 (2005) - 2004
- [j12]Olivier Gascuel, Andy McKenzie:
Performance Analysis of Hierarchical Clustering Algorithms. J. Classif. 21(1): 3-18 (2004) - [c16]Denis Bertrand, Olivier Gascuel:
Topological Rearrangements and Local Search Method for Tandem Duplication Trees. WABI 2004: 374-387 - 2003
- [j11]François Denis, Olivier Gascuel:
On the consistency of the minimum evolution principle of phylogenetic inference. Discret. Appl. Math. 127(1): 63-77 (2003) - [j10]Christophe Fagot, Olivier Gascuel, Patrick Girard, Christian Landrault:
A Ring Architecture Strategy for BIST Test Pattern Generation. J. Electron. Test. 19(3): 223-231 (2003) - [c15]Olivier Elemento, Olivier Gascuel:
An Exact and Polynomial Distance-Based Algorithm to Reconstruct Single Copy Tandem Duplication Trees. CPM 2003: 96-108 - 2002
- [j9]Richard Desper, Olivier Gascuel:
Fast and Accurate Phylogeny Reconstruction Algorithms Based on the Minimum-Evolution Principle. J. Comput. Biol. 9(5): 687-705 (2002) - [c14]Olivier Elemento, Olivier Gascuel:
An efficient and accurate distance based algorithm to reconstruct tandem duplication trees. ECCB 2002: 92-99 - [c13]Richard Desper, Olivier Gascuel:
Fast and Accurate Phylogeny Reconstruction Algorithms Based on the Minimum-Evolution Principle. WABI 2002: 357-374 - 2001
- [j8]Laurent Bréhélin, Olivier Gascuel, Gilles Caraux:
Hidden Markov Models with Patterns to Learn Boolean Vector Sequences and Application to the Built-In Self-Test for Integrated Circuits. IEEE Trans. Pattern Anal. Mach. Intell. 23(9): 997-1008 (2001) - [e2]Olivier Gascuel, Marie-France Sagot:
Computational Biology, First International Conference on Biology, Informatics, and Mathematics, JOBIM 2000, Montpellier, France, May 3-5, 2000, Selected Papers. Lecture Notes in Computer Science 2066, Springer 2001, ISBN 3-540-42242-0 [contents] - [e1]Olivier Gascuel, Bernard M. E. Moret:
Algorithms in Bioinformatics, First International Workshop, WABI 2001, Aarhus, Denmark, August 28-31, 2001, Proceedings. Lecture Notes in Computer Science 2149, Springer 2001, ISBN 3-540-42516-0 [contents] - 2000
- [j7]Olivier Gascuel:
Data Model and Classification by Trees: The Minimum Variance Reduction (MVR) Method. J. Classif. 17(1): 67-99 (2000) - [j6]Vincent Berry, Olivier Gascuel:
Inferring evolutionary trees with strong combinatorial evidence. Theor. Comput. Sci. 240(2): 271-298 (2000) - [c12]Laurent Bréhélin, Olivier Gascuel, Gilles Caraux:
Hidden Markov Models with Patterns and Their Application to Integrated Circuit Testing. ECML 2000: 75-87 - [c11]Vincent Ranwez, Olivier Gascuel:
Phylogenetic Reconstruction Algorithms Based on Weighted 4-Trees. JOBIM 2000: 84-98 - [c10]Laurent Bréhélin, Olivier Gascuel, Gilles Caraux, Patrick Girard, Christian Landrault:
Hidden Markov and Independence Models with Patterns for Sequential BIST. VTS 2000: 359-368
1990 – 1999
- 1999
- [c9]Christophe Fagot, Olivier Gascuel, Patrick Girard, Christian Landrault:
On calculating efficient LFSR seeds for built-in self test. ETW 1999: 7-14 - 1998
- [j5]Olivier Gascuel, Bernadette Bouchon-Meunier, Gilles Caraux, Patrick Gallinari, Alain Guénoche, Yann Guermeur, Yves Lechevallier, Christophe Marsala, Laurent Miclet, Jacques Nicolas, Richard Nock, Mohammed Ramdani, Michèle Sebag, Basavanneppa Tallur, Gilles Venturini, Patrick Vitte:
Twelve Numerical, Symbolic and Hybrid Supervised Classification Methods. Int. J. Pattern Recognit. Artif. Intell. 12(4): 517-571 (1998) - [c8]Christophe Fagot, Olivier Gascuel, Patrick Girard, Christian Landrault:
A Ring Architecture Strategy for BIST Test Pattern Generation. Asian Test Symposium 1998: 418-423 - 1997
- [c7]Vincent Berry, Olivier Gascuel:
Inferring Evolutionary Trees with Strong Combinatorial Evidence. COCOON 1997: 111-123 - 1996
- [c6]Olivier Gascuel:
Concerning the NJ algorithm and its unweighted version, UNJ. Mathematical Hierarchies and Biology 1996: 149-170 - [c5]Pascal Jappy, Richard Nock, Olivier Gascuel:
Negative Robust Learning Results from Horn Claus Programs. ICML 1996: 258-265 - 1995
- [c4]Richard Nock, Olivier Gascuel:
On Learning Decision Committees. ICML 1995: 413-420 - 1994
- [c3]Pascal Jappy, Marie-Catherine Daniel-Vatonne, Olivier Gascuel, Colin de la Higuera:
Learning from Recursive, Tree Structured Examples. ECML 1994: 367-370 - 1993
- [j4]Fernando de Carvalho Gomes, Olivier Gascuel:
SDL, A Stochastic Algorithm for Learning Decision Lists with Limited Complexity. Ann. Math. Artif. Intell. 10(3): 281-302 (1993) - [j3]Olivier Gascuel:
Commentaires sur une histoire de discrétisation. Monde des Util. Anal. Données 11: 28-29 (1993) - 1992
- [j2]Olivier Gascuel, Gilles Caraux:
Distribution-free performance bounds with the resubstitution error estimate. Pattern Recognit. Lett. 13(11): 757-764 (1992) - [c2]Olivier Gascuel, Gilles Caraux:
Statistical Significance in Inductive Learning. ECAI 1992: 435-439
1980 – 1989
- 1988
- [j1]Olivier Gascuel, J. L. Golmard:
A simple method for predicting the secondary structure of globular proteins: implications and accuracy. Comput. Appl. Biosci. 4(3): 357-365 (1988) - [c1]Olivier Gascuel, Antoine Danchin:
Data Analysis Using a Learning Program, a Case Study: An Application of PLAGE to a Biological Sequence Analysis. ECAI 1988: 390-395
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 21:19 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
