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Sigmodon hispidus (Hispid cotton rat) - GCA_004025045.1 (SigHis_v1_BIUU)

Search Sigmodon hispidus

Genome assembly: SigHis_v1_BIUU (GCA_004025045.1)

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Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

Download FASTA, GTF or GFF3 files for genes, cDNAs, ncRNA, proteins

Statistics

Summary

AssemblySigHis_v1_BIUU, INSDC Assembly GCA_004025045.1, Jan 2019
Base Pairs2,730,600,022
Golden Path Length2,730,600,022
Annotation providerEnsembl
Annotation methodEnsembl Genebuild
Genebuild startedOct 2020
Genebuild releasedFeb 2021
Genebuild last updated/patchedJan 2021
Database version110.1

Gene counts

Coding genes25,437
Non coding genes3,915
Small non coding genes3,712
Long non coding genes152
Misc non coding genes51
Pseudogenes976
Gene transcripts40,728

Other

Genscan gene predictions83,509